Once the WAVES repository has been installed, major version changes to the pipeline may result in prior conda environment installations to be outdated. Unfortunately, re-running the configuration pipeline by itself will not be sufficient, which will require removing the existing environments entirely before rerunning the configuration pipeline. To do so, first run the code within the INPUT section of _targets_config.R. Then, run the following code within the R console:
library(reticulate)
conda_remove("WHO_WAVES_stepcount")
conda_remove("WHO_WAVES_accelerometer")
conda_remove("WHO_WAVES_actinet")
conda_remove("WHO_WAVES_oak_1.0")
conda_remove("WHO_WAVES_oak_pre")After removal, re-run the config pipeline (tar_make()) and it will recreate the missing environments.