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Instructions

Running the configuration, main, and analysis pipelines.

Running the Configuration Pipeline

Instructions for running _targets_config.R.

YAML Parameters

Instructions for defining site-specific parameters needed for the main pipeline.

Running the Main Pipeline

Instructions for _WAVES.yml and running _targets.R.

Updating Code

Instructions for pulling latest version from Github and updating pipelines.

Updating Conda Environments

Instructions for updating conda environments when changes have been made to the WAVES repository.

WAVES Project

Guiding documents for WAVES project.

Program of Work
Authorship Guidelines

Transparent definitions and procedures for authorship on WAVES-related publications.

Reference Data Codebook

Description of variables required from some ground-truth data and variables from processing other ground-truth data.

Technical

Guidance for when errors appear or when updates are made to the pipeline.

Updating Conda Environments

Instructions for updating conda environments when changes have been made to the WAVES repository.

Posting GitHub Issue

Instructions if there is an error in running WAVES pipelines and .

Python Methods

Testing

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Test

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